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Fiji (software)

Fiji
Developer(s)Johannes Schindelin, Ignacio Arganda-Carreras, Albert Cardona, Mark Longair, Benjamin Schmid, and others
Stable release
2.9.0 / September 14, 2022 (2022-09-14)[1]
Repositorygithub.com/fiji/fiji
Written inJava
Operating systemany with Java support
TypeImage processing and Image analysis
LicenseGPL v3[2] (some plugins have different licenses[3])
Websitefiji.sc
Screenshot of Fiji in Windows 11

Fiji[4][5] is an open source image processing package based on ImageJ2.

Fiji's main purpose is to provide a distribution of ImageJ2 with many bundled plugins. Fiji features an integrated updating system and aims to provide users with a coherent menu structure, extensive documentation in the form of detailed algorithm descriptions and tutorials, and the ability to avoid the need to install multiple components from different sources.

Fiji is also targeted at developers, through the use of a version control system, an issue tracker, dedicated development channels, and a rapid-prototyping infrastructure in the form of a script editor which supports BeanShell, Jython, JRuby, Clojure, Groovy, JavaScript, and other scripting languages, as well as just-in-time Java development.

  1. ^ "Tags - fiji/fiji". Retrieved 26 November 2022 – via GitHub.
  2. ^ "LICENSE.txt file". Retrieved 25 November 2022 – via GitHub.
  3. ^ "LICENSES file". Retrieved 25 November 2022 – via GitHub.
  4. ^ Primary reference: Johannes Schindelin; Ignacio Arganda-Carreras; Erwin Frise; Verena Kaynig; Mark Longair; Tobias Pietzsch; Stephan Preibisch; Curtis Rueden; Stephan Saalfeld; Benjamin Schmid; Jean-Yves Tinevez; Daniel James White; Volker Hartenstein; Kevin Eliceiri; Pavel Tomancak; Albert Cardona (2012). "Fiji: an open-source platform for biological-image analysis". Nature Methods. 9 (7): 676–682. doi:10.1038/nmeth.2019. PMC 3855844. PMID 22743772.
  5. ^ Fiji was presented publicly for the first time on the ImageJ User and Developer Conference in November 2008.

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